I've been to the temples and the street but was wondering if there are any shops, restaurants or places that are a must see? Where most tourists aren't aware of!
Tokyo Mentsudan is one of the most well-known restaurants in Japan. You can try the best authentic food there.
There are also many good restaurants near the The Tsukiji Market. You can get there early and check them out. There are lines waiting for that good food.
You can view this itinerary for a trip to Tokyo with all needed info in this link.
Izuu is the best sushi i've ever had. Super fresh and definitely a highlight on anyones trip.
Nanzenji Junsei- famous for their tofu (its delicious) but be prepared for the line, it's worth it!